site stats

Chuiqin/irgsea

WebJul 26, 2024 · chuiqin/irGSEA The integration of single cell rank-based gene set enrichment analysis Package index Search the chuiqin/irGSEA package Vignettes README.md Functions 21 Source code 3 Man pages 11 irGSEA.barplot: Stacked bar plot irGSEA.bubble: Bubble plot irGSEA.densityheatmap: Density heatmap WebGitHub - chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis 当然学习的时候如果觉得好用，也别忘点亮一颗星星支持作者，这也是R语言开源的魅力，我们作为使用者对于好用的工具应该给予肯定和支持

王胖的生信笔记第21期：网友的irGSEA包 - 作业部落 Cmd …

WebAug 22, 2024 · Introduction. Acute pancreatitis (AP) is a clinically common critical and acute disease that occurs in approximately 13 million people worldwide every year ().With the exacerbation of alcohol abuse and obesity worldwide, the morbidity of … WebGitHub - chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis 当然学习的时候如果觉得好用，也别忘点亮一颗星星支持作者，这也是R语言开源的魅力，我们作为使用者对于好用的工具应该给予肯定和支持 bus tickets newport news va to norwalk ct https://workfromyourheart.com

chuiqin/irGSEA: The integration of single cell rank-based gene set ...

WebAug 1, 2024 · chuiqin/irGSEA/) in R software was used. This package was. used to score individual cells using multiple gene set enrichment. methods and generate a multiple gene set enrichment score. matrix. WebJul 26, 2024 · chuiqin/irGSEA irGSEA.integrate: Integrate differential gene set calculated by all enrichment... irGSEA.integrate: Integrate differential gene set calculated by all … WebJul 26, 2024 · chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis The integration of single cell rank-based gene set enrichment … cchesle2 jh.edu

The Quest to Build Grace Quan - sanctuaries.noaa.gov

Category:irGSEA.ridgeplot: Ridge plot Easy to show the data distribution by ...

Tags:Chuiqin/irgsea

Chuiqin/irgsea

(PDF) Microglia-specific transcriptional repression of interferon ...

WebJul 26, 2024 · chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis The integration of single cell rank-based gene set enrichment analysis. Meanwhile, you are easy to visualize the results. Getting started README.md Browse package contents Vignettes Man pages API and functions Files WebStress-induced neuroinflammation is considered an important mechanism in the pathogenesis of depression. As immune effector cells in the brain, microglia play an essential role in ...

Chuiqin/irgsea

Did you know?

WebJul 26, 2024 · In chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis. View source: R/plot.R. irGSEA.ridgeplot: R Documentation: Ridge plot Easy to show the data distribution by ridge plot Description. Ridge plot Easy to show the data distribution by ridge plot Usage WebQichun County (simplified Chinese: 蕲春 县; traditional Chinese: 蘄春 縣; pinyin: Qíchūn Xiàn) is a county of eastern Hubei province, People's Republic of China. It is under the …

WebGrace Quan is a modern reconstruction of a Chinese-American shrimp fishing junk, similar to those in the fleet that operated in San Francisco Bay in the late 19th and early 20th …

WebOct 23, 2024 · GSEA的输入文件是一个表达矩阵，我们需要提前把样本进行分组，然后对所有基因基于分组来进行排序，那么这个时候我们最常使用的排序方式就是通过LogFC的大小来进行排序（从大到小），这种排序天生就具有了一种属性即可以表示两组间基因的表达量变化趋势，排序之后的基因列表其顶部可以看作是上调的差异基因，其底部可以看作是下调 … WebGitHub - chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis chuiqin / irGSEA Fork master 1 branch 1 tag chuiqin fix the bug of plot …

WebJul 26, 2024 · chuiqin/irGSEA / irGSEA.halfvlnplot: Half vlnplot irGSEA.halfvlnplot: Half vlnplot In chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis View source: R/plot.R irGSEA.halfvlnplot R Documentation Half vlnplot Description Easy to show the data distribution by half vlnplot Usage

WebSep 1, 2024 · Microglia-specific transcriptional repression of DNA repeats after chronic stress. (A) Genome distribution of down-regulated genes (down_genes, red vertical bars) and DNA repeats (blue vertical bars). bus tickets newportWebThe integration of single cell rank-based gene set enrichment analysis • irGSEA irGSEA Integrate all single cell rank-based gene set enrichment analysis and easy to visualize … c++ chess oopWebNov 1, 2024 · Alternatively, cell-type enrichment analysis using the AUCell algorithm in irGSEA revealed the same results (Fig. 4 E–F). We also did cell deconvolution analysis to estimate the proportions of distinct microglia subpopulations in our bulk microglia RNA-seq in CO and ST groups and found a significant increase of “Homeostatic microglia” and ... cchester ourkidsplacecares.comWebIn chuiqin/irGSEA: The integration of single cell rank-based gene set enrichment analysis View source: R/main.R irGSEA.score R Documentation Calculate enrichment scores … bus tickets nswWebOct 27, 2024 · The prognosis of human papillomavirus (HPV)-infected head and neck squamous cell carcinoma (HNSCC) is often better than that of HPV ⁻ cancer, which is possibly caused by the differences in their ... cchestWebReleases · chuiqin/irGSEA. irGSEA 1.1.3. 08 Apr 08:15 . chuiqin. V1 c42f07f. Compare. Choose a tag to compare. Could not load tags. Nothing to show {{ refName }} default. View all tags. irGSEA 1.1.3 Latest. Latest. This version of irGSEA only supports AUCell, UCell, singscore and ssgsea. Assets 3. All reactions. bus tickets new york to baltimoreWebA list after perform irGSEA.integrate. method: A character. It should be one of the followling : AUCell, UCell, singscore, ssgsea or RRA. Default RRA. upset.width: Width of the whole upset plot. Default 13. upset.height: ... Developed by Chuiqin Fan. Site built with ... c chest freezer best buy